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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 09:15:25 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ppase.html
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#====================================
# Aligned_structures: 4
#   1: 1obwa.pdb
#   2: 1qeza.pdb
#   3: 1wgja.pdb
#   4: 2prd.pdb
#
# Length:        290
# Identity:       27/290 (  9.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     76/290 ( 26.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          124/290 ( 42.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1obwa.pdb               1  ---------------------------SLLNVPA-GKDLP-EDIYVVIEIPANADPIKYE   31
1qeza.pdb               1  ------------------------------KLSP-GKNAP-DVVNVLVEIPQ-GSNIKYE   27
1wgja.pdb               1  TYTTRQIGAKNTLEYKVYIEKDGKPV-SAFHDIPLYADKENNIFNMVVEIPR-WTNAKLE   58
2prd.pdb                1  --------------------------ANLKSLPV-GDKAP-EVVHMVIEVPR-GSGNKYE   31
                                                              g   p      v EiP      KyE

1obwa.pdb              32  IDKESG--ALFVDR---------FMST-AMFYPCNYGYINHTLS------------LDGD   67
1qeza.pdb              28  YDDEEG--VIKVDR---------VLYT-SMNYPFNYGFIPGTLE------------EDGD   63
1wgja.pdb              59  ITKEETLNPIIQDTKKGKLRFVRNCFPH-HGYIHNYGAFPQTWEDPNVSHPETKAVGDND  117
2prd.pdb               32  YDPDLG--AIKLDR---------VLPG-AQFYPGDYGFIPSTLA------------EDGD   67
                            d e g   i  Dr                 Yp nYG ip Tl              DgD

1obwa.pdb              68  PVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHS-KLSKEYDHIKDVNDL  126
1qeza.pdb              64  PLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKT-DPSFSNIKDINDL  122
1wgja.pdb             118  PIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI--N-DPLAPKLNDIEDV  174
2prd.pdb               68  PLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVA--E-DQRLDHIQDIGDV  124
                           P DvLv   y l pG V  vr  G l m DE g DaK  av      d     i Di D 

1obwa.pdb             127  P---ELLKAQIAHFFEHYKDLE--KGKWVKV---EGWENAEAAKAEIVASFERAKNK---  175
1qeza.pdb             123  P---QATKNKIVHFFEHYKELE--PGKYVKI---SGWGSATEAKNRIQLAIKRVS-----  169
1wgja.pdb             175  EKYFPGLLRATNEWFRIYKIPD--GKPENQFAFSGEAKNKKYALDIIKETHDSWKQLIAG  232
2prd.pdb              125  P---EGVKQEIQHFFETYKALEAKKGKWVKV---TGWRDRKAALEEVRACIARYKG----  174
                           p      k  i hfFe YK le   gk vk     gw     A   i     r k     

1obwa.pdb                  --------------------------------------------------     
1qeza.pdb                  --------------------------------------------------     
1wgja.pdb             233  KSSDSKGIDLTNVTLPDTPTYSKAASDAIPPASLKADAPIDKSIDKWFFI  282
2prd.pdb                   --------------------------------------------------     
                                                                             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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