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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Aug 12 22:30:57 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/MUSTANG_HOMSTRAD/results/gluts.html
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#====================================
# Aligned_structures: 14
# 1: 17gsa.pdb
# 2: 1fhe.pdb
# 3: 1glpa.pdb
# 4: 1gsua.pdb
# 5: 1gta.pdb
# 6: 1gtua.pdb
# 7: 1guha.pdb
# 8: 1guka.pdb
# 9: 1gula.pdb
# 10: 1hna.pdb
# 11: 2fhea.pdb
# 12: 2gsra.pdb
# 13: 3gtub.pdb
# 14: 5gsta.pdb
#
# Length: 253
# Identity: 15/253 ( 5.9%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 19/253 ( 7.5%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 61/253 ( 24.1%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
17gsa.pdb 1 ---MPPYTVVYFPVRGRCAALRMLLADQGQSWKEEVVTVE-----TWQ-EGSLKA--SCL 49
1fhe.pdb 1 -----PAKLGYWKLRGLAQPVRLFLEYLGEEYEEHLYGRD-----DREKWMSEKFNMGLD 50
1glpa.pdb 1 ----PPYTIVYFPVRGRCEAMRMLLADQGQSWKEEVVTID-----TWM-QGLLKP--TCL 48
1gsua.pdb 1 -----VVTLGYWDIRGLAHAIRLLLEYTETPYQERRYKAGPAPDFDPSDWTNEKEKLGLD 55
1gta.pdb 1 ----MSPILGYWKIKGLVQPTRLLLEYLEEKYEEHLYERD-----EGDKWRNKKFELGLE 51
1gtua.pdb 1 -----PMILGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLD 55
1guha.pdb 1 -A--EKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSA-----ED--LDKLRNDGYLM 50
1guka.pdb 1 ------PKLYYFNGRGRMESIRWLLAAAGVEFEEEFLETR-----EQ--YEKMQKDGHLL 47
1gula.pdb 1 -----RPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETK-----EQ--LYKLQDGNHLL 48
1hna.pdb 1 -----PMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLD 55
2fhea.pdb 1 -----PAKLGYWKIRGLQQPVRLLLEYLGEKYEEQIYERD-----DGEKWFSKKFELGLD 50
2gsra.pdb 1 ----PPYTITYFPVRGRCEAMRMLLADQDQSWKEEVVTME-----TW---PPLKP--SCL 46
3gtub.pdb 1 SCE-SSMVLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLD 59
5gsta.pdb 1 -----PMILGYWNVRGLTHPIRLLLEYTDSSYEEKRYAMGDAPDYDRSQWLNEKFKLGLD 55
Y rG R L E
17gsa.pdb 50 YGQLPAFQDGDLTLYQSNTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIY 109
1fhe.pdb 51 LPNLPYYIDDKCKLTQSVAIMRYIADKHGMLGTTPEERARISMIEGAAMDLRIGFGRVCY 110
1glpa.pdb 49 YGQLPKFEDGDLTLYQSNAILRHLGRSLGLYGKNQREAAQMDMVNDGVEDLRGKYVTLIY 108
1gsua.pdb 56 FPNLPYLIDGDVKLTQSNAILRYIARKHNMCGETEVEKQRVDVLENHLMDLRMAFARLCY 115
1gta.pdb 52 FPNLPYYIDGDVKLTQSMAIIRYIADKHNMLGGCPKERAEISMLEGAVLDIRYGVSRIAY 111
1gtua.pdb 56 FPNLPYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQTMDNHMQLGMICY 115
1guha.pdb 51 FQQVPMVEIDGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPV 110
1guka.pdb 48 FGQVPLVEIDGMMLTQTRAILSYLAAKYNLYGKDLKERVRIDMYADGTQDLMMMIAVAPF 107
1gula.pdb 49 FQQVPMVEIDGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPF 108
1hna.pdb 56 FPNLPYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCY 115
2fhea.pdb 51 LPNLPYYIDDKCKLTQSLAILRYIADKHGMIGTTSEERARVSMIEGAAVDLRQGISRISY 110
2gsra.pdb 47 FRQLPKFQDGDLTLYQSNAILRHLGRSFGLYGKDQKEAALVDMVNDGVEDLRCKYATLIY 106
3gtub.pdb 60 FPNLPYLLDGKNKITQSNAILRYIARKHNMCGETEEEKIRVDIIENQVMDFRTQLIRLCY 119
5gsta.pdb 56 FPNLPYLIDGSRKITQSNAIMRYLARKHHLCGETEEERIRADIVENQVMDNRMQLIMLCY 115
P Q I G E D
17gsa.pdb 110 TN-YEAGKDDYVKA--------LPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLL 160
1fhe.pdb 111 NPKFEEVKEEYVKE--------LPKTLKMWSDFLG---D-RHYLTGSSVSHVDFMLYETL 158
1glpa.pdb 109 TN-YENGKNDYVKA--------LPGHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLL 159
1gsua.pdb 116 SPDFEKLKPAYLEQ--------LPGKLRQLSRFLG---S-RSWFVGDKLTFVDFLAYDVL 163
1gta.pdb 112 SKDFETLKVDFLSK--------LPEMLKMFEDRLC---H-KTYLNGDHVTHPDFMLYDAL 159
1gtua.pdb 116 NPEFEKLKPKYLEE--------LPEKLKLYSEFLG---K-RPWFAGNKITFVDFLVYDVL 163
1guha.pdb 111 CP-----PEEKDAKLALIKEKIKNRYFPAFEKVLKSH-G-QDYLVGNKLSRADIHLVELL 163
1guka.pdb 108 KT-----PKEKEESYDLILSRAKTRYFPVFEKILKDH-G-EAFLVGNQLSWADIQLLEAI 160
1gula.pdb 109 LK-----PDDQQKEVVNMAQKAIIRYFPVFEKILRGH-G-QSFLVGNQLSLADVILLQTI 161
1hna.pdb 116 DPDFEKLKPEYLQA--------LPEMLKLYSQFLG---K-QPWFLGDKITFVDFIAYDVL 163
2fhea.pdb 111 QPKFEQLKEGYLKD--------LPTTMKMWSDFLG---K-NPYLRGTSVSHVDFMVYEAL 158
2gsra.pdb 107 TN-YEAGKEKYVKE--------LPEHLKPFETLLSQNQGGQAFVVGSQISFADYNLLDLL 157
3gtub.pdb 120 SSDHEKLKPQYLEE--------LPGQLKQFSMFLG---K-FSWFAGEKLTFVDFLTYDIL 167
5gsta.pdb 116 NPDFEKQKPEFLKT--------IPEKMKLYSEFLG---K-RPWFAGDKVTYVDFLAYDIL 163
L G D
17gsa.pdb 161 LIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLASPEYVNLPINGN------------- 207
1fhe.pdb 159 DSIRYLAPHCLDEFPKLKEFKSRIEALPKIKAYMESKRFIKWPLNGW------------- 205
1glpa.pdb 160 LIHQVLAPGCLDNFPLLSAYVARLSARPKIKAFLSSPEHVNRPINGN------------- 206
1gsua.pdb 164 DQQRMFVPDCPELQGNLSQFLQRFEALEKISAYMRSGRFMKAPIFWY------------- 210
1gta.pdb 160 DVVLYMDPMCLDAFPKLVCFKKRIEAIPQIDKYLKSSKYIAWPLQGW------------- 206
1gtua.pdb 164 DLHRIFEPKCLDAFPNLKDFISRFEGLEKISAYMKSSRFLPRPVFSK------------- 210
1guha.pdb 164 YYVEELDSSLISSFPLLKALKTRISNLPTVKKFLQP-GS-PRKPPMDEKSLEEARKIFRF 221
1guka.pdb 161 LMVEELSAPVLSDFPLLQAFKTRISNIPTIKKFLQP-GS-QRKPPPDGPYVEVVRIV--- 215
1gula.pdb 162 LALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEP-GS-KKKPPPDEIYVRTVYNIF-- 217
1hna.pdb 164 ERNQVFEPSCLDAFPNLKDFISRFEGLEKISAYMKSSRFLPRPVFTK------------- 210
2fhea.pdb 159 DAIRYLEPHCLDHFPNLQQFMSRIEALPSIKAYMESNRFIKWPLNGW------------- 205
2gsra.pdb 158 RIHQVLNPSCLDAFPLLSAYVARLSARPKIKAFLASPEHVNRPINGN------------- 204
3gtub.pdb 168 DQNRIFDPKCLDEFPNLKAFMCRFEALEKIAAYLQSDQFCKMPINNK------------- 214
5gsta.pdb 164 DQYHIFEPKCLDAFPNLKDFLARFEGLKKISAYMKSSRYLSTPIFSK------------- 210
fp L r
17gsa.pdb 208 GKQ---------- 210
1fhe.pdb 206 AA-SFGAGDA--- 214
1glpa.pdb 207 GKQ---------- 209
1gsua.pdb 211 TA-LWNNK----- 217
1gta.pdb 207 QA-TFGGGDHPPK 218
1gtua.pdb 211 MA-VWGNK----- 217
1guha.pdb -------------
1guka.pdb -------------
1gula.pdb -------------
1hna.pdb 211 MA-VFGNK----- 217
2fhea.pdb 206 HA-QFGGGDAPP- 216
2gsra.pdb 205 GKQ---------- 207
3gtub.pdb 215 MA-QWGNKPVC-- 224
5gsta.pdb 211 LA-QWSNK----- 217
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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