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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 06:52:32 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ferritin.html
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#====================================
# Aligned_structures: 4
#   1: 1aew.pdb
#   2: 1bg7.pdb
#   3: 1rci.pdb
#   4: 2fha.pdb
#
# Length:        173
# Identity:       61/173 ( 35.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    105/173 ( 60.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           23/173 ( 13.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1aew.pdb                1  -SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKRE   59
1bg7.pdb                1  DSQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEERE   60
1rci.pdb                1  -SQVRQNFHQDCEAGLNRTVNLKFYSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKE   59
2fha.pdb                1  TSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEERE   60
                            SQvRQN h d EAa NR vNl lyaSY YLSm  YFdRDDvAL n akfF e s EerE

1aew.pdb               60  GAERLLKMQNQRGGRALFQDLQKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQ  119
1bg7.pdb               61  HAEKLMKDQNKRGGRIVLQDVQKPERDEWGNTLEAMQAALQLEKTVNQALLDL-------  113
1rci.pdb               60  HAEKLIEYQNQRGGRVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADK  119
2fha.pdb               61  HAEKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDK  120
                           hAEkL k QNqRGGR  lQd qKP  D W   l Am  Al LeK vNQaLLdL       

1aew.pdb              120  ADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVGSQAGLGEYLFERLTL--  170
1bg7.pdb              114  -------------PEEQVKSIKQLGDYITNLKRLGLPQNGMGEYLFDKHTMGE  153
1rci.pdb              120  SDPHMTDFLESPYLSESVETIKKLGDHITSLKKLWSSHPGMAEYLFNKHTLG-  171
2fha.pdb              121  NDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLG-  172
                                        l E Vk IK lGDh Tnl  l     G  EYLF khTl  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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