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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Aug 12 23:08:11 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/MUSTANG_HOMSTRAD/results/fabp.html
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#====================================
# Aligned_structures: 17
# 1: 1b56.pdb
# 2: 1bwya.pdb
# 3: 1cbia.pdb
# 4: 1cbs.pdb
# 5: 1crb.pdb
# 6: 1eioa.pdb
# 7: 1fdqa.pdb
# 8: 1ftpa.pdb
# 9: 1ggla.pdb
# 10: 1hmt.pdb
# 11: 1ifc.pdb
# 12: 1lfo.pdb
# 13: 1lif.pdb
# 14: 1mdc.pdb
# 15: 1opba.pdb
# 16: 1pmpa.pdb
# 17: 3ifba.pdb
#
# Length: 151
# Identity: 2/151 ( 1.3%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 4/151 ( 2.6%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 29/151 ( 19.2%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1b56.pdb 1 V-K--EFAGIKYKLDSQTNFEEYMKAIGVGAIERKAGLAL--SPVIELEILDGDKFKLTS 55
1bwya.pdb 1 --V--EAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVT--KPTVIISQE-GDKVVIRT 53
1cbia.pdb 1 ------AFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHD--NLKLTITQE-GNKFTVKE 51
1cbs.pdb 1 -TV--QQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMA--KPDCIITCD-GKNLTIKT 54
1crb.pdb 1 --V--DAFVGTWKLVDSKNFDDYMKSLGVGFATRQVGNMT--KPTTIIEVN-GDTVIIKT 53
1eioa.pdb 1 --C--DAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMA--KPNMIISVN-GDLVTIRS 53
1fdqa.pdb 1 ---P-PNLTGYYRFVSQKNMEDYLQALNISLAVRKIALLL--KPDKEIEHQ-GNHMTVRT 53
1ftpa.pdb 1 ------AFTGKYEIESEKNYDEFMKRLALPSDAIDKARNL--KIISEVKQD-GQNFTWSQ 51
1ggla.pdb 1 -----SYLGKVYSLVKQENFDGFLKSAGLSDDKIQALVSD--KPTQKMEAN-GDSYSNTS 52
1hmt.pdb 1 ----TKDQNGTWEMESNENFEGYMKALDIDFATRKIAVRL--TQTKIIVQD-GDNFKTKT 53
1ifc.pdb 1 --V--DAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMT--KPTTIIEKN-GDILTLKT 53
1lfo.pdb 1 ------AFDGTWKVDRNENYEKFMEKMGINVVKRKLGAHD--NLKLTITQE-GNKFTVKE 51
1lif.pdb 1 -----PNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQD-GDQFYIKT 54
1mdc.pdb 1 -----MNFSGKYQVQSQENFEPFMKAMGLPEDLIQKGKDI--KGVSEIVHE-GKKVKLTI 52
1opba.pdb 1 ----PVDFNGYWKMLSNENFEEYLRALDVNVALRKIANLL--KPDKEIVQD-GDHMIIRT 53
1pmpa.pdb 1 -----PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQE-GDTFYIKT 54
3ifba.pdb 1 --S--NKFLGTWKLVSSENFDEYMKALGVGLATRKLGNLA--KPRVIISKK-GDIITIRT 53
n G
1b56.pdb 56 KTA-IKNTEFTFKLGEEFDEET--LDGRKVKSTITQDGPNKLVHEQKG---D-H--PTII 106
1bwya.pdb 54 LST-FKNTEISFQLGEEFDETT--ADDRNCKSVVSLDG-DKLVHIQKW---D-G-KETNF 104
1cbia.pdb 52 SSA-FRNIEVVFELGVTFNYNL--ADGTELRGTWSLEG-NKLIGKFKR---TDNGNELNT 104
1cbs.pdb 55 EST-LKTTQFSCTLGEKFEETT--ADGRKTQTVCNFTD-GALVQHQEW---D-G-KESTI 105
1crb.pdb 54 QST-FKNTEISFKLGVEFDETT--ADDRKVKSIVTLDG-GKLVHVQKW---N-G-QETSL 104
1eioa.pdb 54 EST-FKNTEISFKLGVEFDEIT--ADDRKVKSIITLDG-GALVQVQKW---D-G-KSTTI 104
1fdqa.pdb 54 LST-FRNYTVQFDVGVEFEEDLRSVDGRKCQTIVTWEE-EHLVCVQKG---E-V-PNRGW 106
1ftpa.pdb 52 QYPGGHSITNTFTIGKECDIET--IGGKKFKATVQMEGGKVVVNS-P---------NYHH 99
1ggla.pdb 53 TGG-GGAKTVSFKSGVEFDDVI--GAGDSVKSMYTVDG-NVVTHVVKG---D-A-GVATF 103
1hmt.pdb 54 NST-FRNYDLDFTVGVEFDEHTKGLDGRNVKTLVTWEG-NTLVCVQKG---E-K-ENRGW 106
1ifc.pdb 54 HST-FKNTEISFKLGVEFDETT--ADDRKVKSIVTLDG-GKLVHLQKW---D-G-QETTL 104
1lfo.pdb 52 SSN-FRNIDVVFELGVDFAYSL--ADGTELTGTWTMEG-NKLVGKFKR---VDNGKELIA 104
1lif.pdb 55 STT-VRTTEINFKVGEGFEEET--VDGRKCRSLPTWENENKIHCTQTLLEGD-G-PKTYW 109
1mdc.pdb 53 TYG-SKVIHNEFTLGEEELE-T--MTGEKVKAVVKMEGDNKMVTTFK---------GIKS 99
1opba.pdb 54 LST-FRNYIMDFQVGKEFEEDLTGIDDRKCMTTVSWDG-DKLQCVQKG---E-K-EGRGW 106
1pmpa.pdb 55 STT-VRTTEINFKVGEEFEEQT--VDGRPCKSLVKWESENKMVCEQKLLKGE-G-PKTSW 109
3ifba.pdb 54 ESP-FKNTEISFKLGQEFEETT--ADNRKTKSTVTLAR-GSLNQVQKW---N-G-NETTI 104
f G
1b56.pdb 107 IREFS-KEQCVITIKLG--DLVATRIYKAQ- 133
1bwya.pdb 105 VREIK-DGKMVMTLTFG--DVVAVRHYEKA- 131
1cbia.pdb 105 VREII-GDELVQTYVYE--GVEAKRIFKKD- 131
1cbs.pdb 106 TRKLK-DGKLVVECVMN--NVTCTRIYEKVE 133
1crb.pdb 105 VREMV-DGKLILTLTHG--TAVCTRTYEKQA 132
1eioa.pdb 105 KRKRD-GDKLVVECVMK--GVTSTRVYERA- 131
1fdqa.pdb 107 RHWLE-GEMLYLELTAR--DAVCEQVFRKVH 134
1ftpa.pdb 100 TAEIV-DGKLVEVSTVG--GVSYERVSKKLA 127
1ggla.pdb 104 KKEYN-GDDLVVTITSSNWDGVARRYYKA-- 131
1hmt.pdb 107 KQWVE-GDKLYLELTCG--DQVCRQVFKKK- 133
1ifc.pdb 105 VRELI-DGKLILTLTHG--TAVCTRTYEKE- 131
1lfo.pdb 105 VREIS-GNELIQTYTYE--GVEAKRIFKKE- 131
1lif.pdb 110 TRELA-NDELILTFGAD--DVVCTRIYVRE- 136
1mdc.pdb 100 VTEFN-GDTITNTMTLG--DIVYKRVSKRI- 126
1opba.pdb 107 TQWIE-GDELHLEMRAE--GVTCKQVFKKVH 134
1pmpa.pdb 110 TRELTNDGELILTMTAD--DVVCTRVYVRE- 137
3ifba.pdb 105 KRKLV-DGKMVVECKMK--DVVCTRIYEKV- 131
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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