################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Aug 12 21:47:16 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/MUSTANG_HOMSTRAD/results/cryst.html
################################################################################################
#====================================
# Aligned_structures: 7
#   1: 1a45.pdb
#   2: 1a5da.pdb
#   3: 1bd7a.pdb
#   4: 1elpa.pdb
#   5: 1prs.pdb
#   6: 2bb2.pdb
#   7: 4gcr.pdb
#
# Length:        289
# Identity:        4/289 (  1.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      9/289 (  3.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          243/289 ( 84.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1a45.pdb                1  -GKITFYEDRGFQGRHYECSSDH-SNLQ--PYFSRCNSIRVDS-GCWMLYEQPNFQGPQY   55
1a5da.pdb               1  -GKITFYEDRGFQGRHYECSTDH-SNLQ--PYFSRCNSVRVDS-GCWMLYEQPNFTGCQY   55
1bd7a.pdb               1  EHKIILYENPNFTGKKMEIVDDDVPSFHAHGYQEKVSSVRVQS-GTWVGYQYPGYRGLQY   59
1elpa.pdb               1  -GKITFYEDRGFQGRHYECSSDH-SNLQ--PYLGRCNSVRVDS-GCWMIYEQPNYLGPQY   55
1prs.pdb                1  -------------------------------------------MANITVFYNEDFQGKQV   17
2bb2.pdb                   ------------------------------------------------------------     
4gcr.pdb                1  -GKITFYEDRGFQGHCYECSSDC-PNLQ--PYFSRCNSIRVDS-GCWMLYERPNYQGHQY   55
                                                                                       

1a45.pdb               56  FLRRGDYPD--YQQWMGLND-SIRSCRLIPHTG-S--HRLRIYER------------ED-   96
1a5da.pdb              56  FLRRGDYPD--YQQWMGFSD-SVRSCRLIPHSS-S--HRIRIYER------------ED-   96
1bd7a.pdb              60  LLEKGDYKD--NSDFGAPHP-QVQSVRRIRDMQGN---PKIIIFE----------Q-EN-  101
1elpa.pdb              56  FLRRGDYPD--YQQWMGLND-SIRSCRLIPHAG-S--HRLRLYER------------ED-   96
1prs.pdb               18  DLPPGNYTRAQLAALGIEN-NTISSVKVPP------GVKAILYQNDGFAGDQIEVVANAE   70
2bb2.pdb                1  -----------------------------------LNPKIIIFEQENFQGHSHELNGPCP   25
4gcr.pdb               56  FLRRGDYPD--YQQWMGFND-SIRSCRLIPQHTGT--FRMRIYER------------DD-   97
                                                                                       

1a45.pdb               97  ---------------------------------YRGQMVEITEDC-SSLHDR---FHFSE  119
1a5da.pdb              97  ---------------------------------YRGQMVEITDDC-PHLQDR---FHFSD  119
1bd7a.pdb             102  ---------------------------------FQGHSHELSGPC-PNL-KE---TGMEK  123
1elpa.pdb              97  ---------------------------------YRGQMIEITEDC-SSLQDR---FHFNE  119
1prs.pdb               71  ELGPL---NNNVSSIRVISVPVQPRARFFYK-----------------------------   98
2bb2.pdb               26  NLK--ETGVEKAGSVLVQ---AGPWVGYEQ-ANCKGEQFVFEKGEYPRWDSWTSSRRTDS   79
4gcr.pdb               98  ---------------------------------FRGQMSEITDDC-PSLQDR---FHLTE  120
                                                                                       

1a45.pdb              120  IHSFNVL-E--------------------------------------------------G  128
1a5da.pdb             120  FHSFHVM-E--------------------------------------------------G  128
1bd7a.pdb             124  AGSVLVQ-A--------------------------------------------------G  132
1elpa.pdb             120  IHSLNVL-E--------------------------------------------------G  128
1prs.pdb               99  -------------------EQFDG-KEVDLPPGQ--YTQAELERYGIDNNTISSVKPQGL  136
2bb2.pdb               80  LSSLRPIKVDSQEHKITLYENPNFTGKKMEVIDDDVPSFHAH----GYQEKVSSVRVQSG  135
4gcr.pdb              121  VHSLNVL-E--------------------------------------------------G  129
                                                                                      g

1a45.pdb              129  WWVLYEMTNYRGRQYLLRPGDYRRYHD-WG--ATNARVGSLRRAVDFY-  173
1a5da.pdb             129  YWVLYEMPNYRGRQYLLRPGEYRRYHD-WG--AMNARVGSLRRIMDFY-  173
1bd7a.pdb             133  PWVGYEQANCKGEQFVFEKGEYPRWDS-WTSSRRTDSLSSLRPI-K---  176
1elpa.pdb             129  SWVLYELPNYRGRQYLLRPGEYRRYHD-WG--AMNAKVGSLRRVIDIY-  173
1prs.pdb              137  AVVLFKNDNFSGDTLPVNSDA-PTLGA------MNNNTSSIRIS-----  173
2bb2.pdb              136  TWVGYQYPGYRGLQYLLEKGDYKDSG-DFG--APQPQVQSVRRIRDMQW  181
4gcr.pdb              130  SWVLYEMPSYRGRQYLLRPGEYRRYLD-WG--AMNAKVGSLRRVMDFY-  174
                            wV y      G q     g                   S R       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################