################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:00:11 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/blmb.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1bme.pdb
#   2: 1znba.pdb
#
# Length:        230
# Identity:       74/230 ( 32.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     74/230 ( 32.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           11/230 (  4.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bme.pdb                1  TVIKNETGTISISQLNKNVWVHTELGSFNGEAVPSNGLVLNTSKGLVLVDSSWDDKLTKE   60
1znba.pdb               1  KSVKIS-DDISITQLSDKVYTYVSLAEIE-GMVPSNGMIVINNHQAALLDTPINDAQTET   58
                              K     ISI QL   V     L       VPSNG          L D    D  T  

1bme.pdb               61  LIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKERGIKAHSTALTAELAKKNGYEEPLGD  120
1znba.pdb              59  LVNWVADSLHAKVTTFIPNHWHGDCIGGLGYLQKKGVQSYANQMTIDLAKEKGLPVPEHG  118
                           L   V       VT  I  H H D IGG   L   G        T  LAK  G   P   

1bme.pdb              121  LQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLPQYNILVGGCLVKSTSAKDLGNVADAYV  180
1znba.pdb             119  FTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLPTENILFGGCMLKDNQATSIGNISDADV  178
                                      M     Y G GH  DNIVVWLP  NIL GGC  K   A   GN  DA V

1bme.pdb              181  NEWSTSIENVLKRYRNINAVVPGHGEVGDKGLLLHTLDLLK---------  221
1znba.pdb             179  TAWPKTLDKVKAKFPSARYVVPGHGDYGGTELIEHTKQIVNQYIESTSKP  228
                             W      V         VVPGHG  G   L  HT              


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################