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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 19:12:41 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/blm.html
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#====================================
# Aligned_structures: 8
#   1: 1bsg.pdb
#   2: 1btl.pdb
#   3: 1bul.pdb
#   4: 1bza.pdb
#   5: 1mfo.pdb
#   6: 1shva.pdb
#   7: 3blm.pdb
#   8: 4blma.pdb
#
# Length:        281
# Identity:       28/281 ( 10.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     45/281 ( 16.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           35/281 ( 12.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bsg.pdb                1  ---S--DAERRLAGLERASGARLGVYAYDTGSGRT-VAYRADELFPMCSVFKTLSSAAVL   54
1btl.pdb                1  --HP--ETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVL   56
1bul.pdb                1  N--T--KGIDEIKNLETDFNGRIGVYALDTGSGKS-FSYRANERFPLCSSFKGFLAAAVL   55
1bza.pdb                1  ------SVQQQLEALEKSSGGRLGVALINTADNSQ-ILYRADERFAMCSTSKVMAAAAVL   53
1mfo.pdb                1  ---A--PIDDQLAELERRDNVLIGLYAANLQSGRR-ITHRPDEMFAMCSTFKGYVAARVL   54
1shva.pdb               1  ----SPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMSTFKVVLCGAVL   56
3blm.pdb                1  -K--------ELNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRFAYASTSKAINSAILL   50
4blma.pdb               1  ---------DDFAKLEEQFDAKLGIFALDTGTNRT-VAYRPDERFAFASTIKALTVGVLL   50
                                          E       G               r  e F   S  K       L

1bsg.pdb               55  RDLDRNGE-FLSRRILYTQDDVEQADGAPETGKPQNLANGMTVEELCEVSITASDNCAAN  113
1btl.pdb               57  SRID-AGQEQLGRRIHYSQNDL--VEYSPVTEK--HLTDGMTVRELCSAAITMSDNTAAN  111
1bul.pdb               56  KGSQ-DNRLNLNQIVNYNTRSL--EFHSPITTK--YKDNGMSLGDMAAAALQYSDNGATN  110
1bza.pdb               54  KQSE-SDKHLLNQRVEIKKSDL--VNYNPIAEK--HVNGTMTLAELGAAALQYSDNTAMN  108
1mfo.pdb               55  QMAE-HGEISLDNRVFVDADAL--VPNSPVTEA--RAGAEMTLAELCQAALQRSDNTAAN  109
1shva.pdb              57  ARVD-AGDEQLERKIHYRQQDL--VDYSPVSEK--HLADGMTVGELCAAAITMSDNSAAN  111
3blm.pdb               51  EQVP--YN-KLNKKVHINKDDI--VAYSPILEK--YVGKDITLKALIEASMTYSDNTANN  103
4blma.pdb              51  QQKS--IE-DLNQRITYTRDDL--VNYNPITEK--HVDTGMTLKELADASLRYSDNAAQN  103
                                     L                 P   k       mt   l  a    SDN A N

1bsg.pdb              114  LMLRE-LGGPAAVTRFVRSLGDRVTRLDRWEPELNSAEPGRVTDTTSPRAITRTYGRLVL  172
1btl.pdb              112  LLLTT-IGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLLT  170
1bul.pdb              111  IILERYIGGPEGMTKFMRSIGDEDFRLDRWELDLNTAIPGDERDTSTPAAVAKSLKTLAL  170
1bza.pdb              109  KLIAH-LGGPDKVTAFARSLGDETFRLDRTAPTLNTAIPGDPRDTTTPLAMAQTLKNLTL  167
1mfo.pdb              110  LLLKT-IGGPAAVTAFARSVGDERTRLDRWEVELNSAIPGDPRDTSTPAALAVGYRAILA  168
1shva.pdb             112  LLLAT-VGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLRKLLT  170
3blm.pdb              104  KIIKE-IGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIA  162
4blma.pdb             104  LILKQ-IGGPESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTSTARALVTSLRAFAL  162
                                  GGp          GD      R e  LN   P    DT  p a          

1bsg.pdb              173  GDALNPRDRRLLTSWLLANTTSGDRFRAGLPDDWTLGDKTGAGR-Y-GTNNDAGVTWPPG  230
1btl.pdb              171  GELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGE-R-GSRGIIAALGPD-  227
1bul.pdb              171  GNILSEHEKETYQTWLKGNTTGAARIRASVPSDWVVGDKTGSCGAY-GTANDYAVVWPKN  229
1bza.pdb              168  GKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKTGSGD-Y-GTTNDIAVIWPEN  225
1mfo.pdb              169  GDALSPPQRGLLEDWMRANQTS--SMRAGLPEGWTTADKTGSGD-Y-GSTNDAGIAFGPD  224
1shva.pdb             171  SQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGAGE-R-GARGIVALLGPN-  227
3blm.pdb              163  NGKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAI-TYASRNDVAFVYPKG  221
4blma.pdb             163  EDKLPSEKRELLIDWMKRNTTGDALIRAGVPDGWEVADKTGAAS-Y-GTRNDIAIIWPPK  220
                              L       l  w           r   P  w   DK G      g         p  

1bsg.pdb              231  -RA-PIVLTVLTAKTE-Q-DAARDDGLVADAARVLAETLG-  266
1btl.pdb              228  -GKPSRIVVIYTTGSQATMDE--RNRQIAEIGASLIKHW--  263
1bul.pdb              230  -RA-PLIISVYTTKNE-K-EAKHEDKVIAEASRIAIDNLK-  265
1bza.pdb              226  -HA-PLVLVTYFTQPE-Q-KAERRRDILAAAAKIVT-----  257
1mfo.pdb              225  -GQ-RLLLVMMTRSQAHDPKAENLRPLIGELTALVLPSLL-  262
1shva.pdb             228  -NKAERIVVIYLRDTPASMAE--RNQQIAGIGAALIEHWQR  265
3blm.pdb              222  QSE-PIVLVIFTNKDN-K-SDKPNDKLISETAKSVMKEF--  257
4blma.pdb             221  -GD-PVVLAVLSSRDK-K-DAKYDDKLIAEATKVVMKALN-  256
                                                                    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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