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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 23:23:38 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Sulfatase.html
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#====================================
# Aligned_structures: 2
#   1: 1auk.pdb
#   2: 1fsu.pdb
#
# Length:        523
# Identity:      124/523 ( 23.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    124/523 ( 23.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           92/523 ( 17.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1auk.pdb                1  -RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLTPSRAALLT   59
1fsu.pdb                1  SRPPHLVFLLADDLGWNDVGFHGSRIR-TPHLDALAAGGVLLDNYYT-QPLTPSRSQLLT   58
                            RPP  V   ADDLG  D G  G     TP LD LAAGG      Y    LTPSR  LLT

1auk.pdb               60  GRLPVRMGMYPGVLVPSSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPEGAFLPPH  119
1fsu.pdb               59  GRYQIRTGLQHQIIWPCQPSCVPLDEKLLPQLLKEAGYTTHMVGKWHLGMYRK-ECLPTR  117
                           GR   R G       P      PL E      L   GY T M GKWHLG       LP  

1auk.pdb              120  QGFHRFLGIPYSH---DQGPCQNLTCFPPATPCDGGCD-QGLV--PIPLLANLSVEA--Q  171
1fsu.pdb              118  RGFDTYFGYLLGSEDYYS-HER--------CTLID---ALNVTRCALDFRDGEEVATGYK  165
                            GF    G                                              V     

1auk.pdb              172  PPWLPGLEARYMAFAHDLMADAQR-QDRPFFLYYASHHTHYPQFSGQSFA-ERSGR----  225
1fsu.pdb              166  NM---YSTNIFTKRAIALITNH--PPEKPLFLYLALQSVHEPLQVPEEYLKPYDF-IQDK  219
                                         A  L          P FLY A    H P                  

1auk.pdb              226  --GPFGDSLMELDAAVGTLMTAIGDLGLLEETLVIFTADNGPETMRMSRGGCSGLLRCGK  283
1fsu.pdb              220  NRHHYAGMVSLMDEAVGNVTAALKSSGLWNNTVFIFSTDNGGQTLA---GGNNWPLRGRK  276
                                       D AVG    A    GL   T  IF  DNG  T     GG    LR  K

1auk.pdb              284  GTTYEGGVREPALAFWPGH-IAPGVTHELASSLDLLPTLAALAGAPLP-NVTLDGFDLSP  341
1fsu.pdb              277  WSLWEGGVRGVGFVASPLLKQKGVKNRELIHISDWLPTLVKLARGHTNGTKPLDGFDVWK  336
                               EGGVR       P          EL    D LPTL  LA         LDGFD   

1auk.pdb              342  LLLGTGKSPRQSLFFYPSY--PDEVR---------GV-FAVRTGKYKAHFFTQGSAHSDT  389
1fsu.pdb              337  TISEGSPSPRIELLHN-IDPNFVD--SSPCSAFNTSVHAAIRHGNWKLLTGY---PGCGY  390
                                  SPR  L                       V  A R G  K             

1auk.pdb              390  TADPACHA--SSSLTAHE----P-PLLYDLSKDPGENYNLLGATPE--VLQALKQLQLLK  440
1fsu.pdb              391  WF--PPPSQYNVSEIPSSDPPTKTLWLFDIDRDPEERHDLS-----REYPHIVTKLLSRL  443
                                       S             L D   DP E   L               L    

1auk.pdb              441  AQLDAAVTFGPSQVARG-EDPALQICCHPGCTPRPACCHCP--  480
1fsu.pdb              444  QFYHKH--SVPVYF--PAQDPRCDPKA-TGVWGP-------WM  474
                                     P        DP        G             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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