################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 09:24:02 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/RRF.html
################################################################################################
#====================================
# Aligned_structures: 4
#   1: 1dd5a.pdb
#   2: 1eh1a.pdb
#   3: 1ek8a.pdb
#   4: 1ge9a.pdb
#
# Length:        190
# Identity:       38/190 ( 20.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     94/190 ( 49.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           12/190 (  6.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1dd5a.pdb               1  V-----NPFIKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLAT   55
1eh1a.pdb               1  --M-TLKELYAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIAT   57
1ek8a.pdb               1  ----MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLAS   56
1ge9a.pdb               1  -MIKELEDIFKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGT   59
                                     kea   M k  E         RTgraspall  ikVeYYG   P  Qlat

1dd5a.pdb              56  ISISEERTLVIKPWDKSVLSLIEKAINASDL-GLNPINDGNVIRLVFPSPTTEQREKWVK  114
1eh1a.pdb              58  VTAPDPRTLVVQSWDQNALKAIEKAIRDSD-LGLNPSNKGDALYINIPPLTEERRKDLVR  116
1ek8a.pdb              57  VTVEDSRTLKINVFDRSMSPAVEKAIMASDL-GLNPNSAGSDIRVPLPPLTEERRKDLTK  115
1ge9a.pdb              60  ISVPEHNQIVIQVWDQNAVPAIEKAIREEL--NLNPTVQGNVIRVTLPPLTEERRRELVR  117
                                 rtlvi  wD     aiEKAI  sd  gLNP   G  ir   PplTeErR  lv 

1dd5a.pdb             115  KAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF  174
1eh1a.pdb             117  AVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA  176
1ek8a.pdb             116  IVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAAL  175
1ge9a.pdb             118  LLHKITEEARVRVRNVRREAKEMIEELEG---ISEDEKKRALERLQKLTDKYIDEINKLM  174
                                 Ee rva RN RRea  k k l k   isED  kR     QKlTD  I k     

1dd5a.pdb             175  EIKKEEIMEF  184
1eh1a.pdb             177  EKKEQEILG-  185
1ek8a.pdb             176  ADKEAELMQF  185
1ge9a.pdb             175  EAKEKEIMSV  184
                           e Ke Eim  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################