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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 22:54:50 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Pyridox_oxidase.html
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#====================================
# Aligned_structures: 2
#   1: 1ci0a.pdb
#   2: 1dnla.pdb
#
# Length:        210
# Identity:       73/210 ( 34.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     73/210 ( 34.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           20/210 (  9.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ci0a.pdb               1  FTLNEKQLTDDPIDLFTKWFNEAKEDPR-ETLPEAITFSSAELPSGRVSSRILLFKELDH   59
1dnla.pdb               1  GGLRRRDLPADPLTLFERWLSQACEAKLADPTA---VVATV-DEHGQPYQRIVLLKHYD-   55
                             L    L  DP  LF  W   A E                    G    RI L K  D 

1ci0a.pdb              60  RGFTIYSN-WGTSRKAHDIATNPNAAIVFFWKDLQRQV--RVEGITEHVNRETSERYFKT  116
1dnla.pdb              56  -EKGVFY-TNLGSRKAHQIENNPRVSLLFPWHTLE---RQVVIGKAERLSTLEV-KYFHS  109
                                       SRKAH I  NP     F W  L       V G  E         YF  

1ci0a.pdb             117  RPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDYWGGLRIVPLEIEFW  176
1dnla.pdb             110  RPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQ-QGEVPLPSFWGGFRVSLEQIEFW  168
                           RPR S IGAW S QS  I  R  L          F      P P  WGG R     IEFW

1ci0a.pdb             177  QGRPSRLHDRFVYRRKTEN-DPWKVVRLAP  205
1dnla.pdb             169  QGGEHRLHDRFLYQRE---NDAWKIDRLAP  195
                           QG   RLHDRF Y R     D WK  RLAP


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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