################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 14:41:35 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/HGTP_anticodon.html
################################################################################################
#====================================
# Aligned_structures: 6
#   1: 1atia.pdb
#   2: 1evla.pdb
#   3: 1h4vb.pdb
#   4: 1hc7a.pdb
#   5: 1kmma.pdb
#   6: 1qe0a.pdb
#
# Length:        142
# Identity:        2/142 (  1.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      7/142 (  4.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           52/142 ( 36.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1atia.pdb               1  -----Q-LAPIKVAVIPLVKN----RPEITEYAKRLKARLLAL-G-LGRVLYED--TGNI   46
1evla.pdb               1  --FPTW-LAPVQVVIMNIT------D-SQSEYVNELTQKLSNA-G-IRV-KADLR-NEKI   46
1h4vb.pdb               1  EE------KGPDLYLIPLT------E-EAVAEAFYLAEALRP--R-LRA-EYALA-PRKP   42
1hc7a.pdb               1  --LPPR-LAPIQVVIVPIY--KDESRERVLEAAQGLRQALLAQ-G-LRV-HLDDRDQHTP   52
1kmma.pdb               1  -------DPVVDIYLVASG------A-DTQSAAMALAERLRDELPGVKL-MTNHG-GGNF   44
1qe0a.pdb               1  ------IEENLDLFIVTMG------D-QADRYAVKLLNHLRHN-G-IKA-DKDYL-QRKI   43
                                                           a  L   L                    

1atia.pdb              47  GKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDTMEQIR-LHVDELEGFL  105
1evla.pdb              47  GFKIREHTLRRVPYMLVCGDKEVE---------SGKVAVRTRR-GKDLGSMDVNEVIEKL   96
1h4vb.pdb              43  AKGLEEALKRGAAFAGFLGEDELR---------AGEVTLKRLATGEQVR-LSREEVPGYL   92
1hc7a.pdb              53  GYKFHEWELKGVPFRVELGPKDLE---------GGQAVLASRL-GGKET-LPLAALPEAL  101
1kmma.pdb              45  KKQFARADKWGARVAVVLGESEVA---------NGTAVVKDLRSGEQTA-VAQDSVAAHL   94
1qe0a.pdb              44  KGQMKQADRLGAKFTIVIGDQELE---------NNKIDVKNMTTGESET-IELDALVEYF   93
                                     g       g                         g              l

1atia.pdb             106  RERLRW----------------  111
1evla.pdb              97  QQEIRS-----RSLKQLEE---  110
1h4vb.pdb              93  LQALG-----------------   97
1hc7a.pdb             102  PGKLD-AFHEEL-------YRR  115
1kmma.pdb              95  RTLLG-----------------   99
1qe0a.pdb              94  KK--------------------   95
                                                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################