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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:01:01 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/G6PD_C.html
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#====================================
# Aligned_structures: 2
#   1: 1dpga.pdb
#   2: 1qkia.pdb
#
# Length:        307
# Identity:       89/307 ( 29.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     89/307 ( 29.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           27/307 (  8.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1dpga.pdb               1  -----KEMVQNIAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDM   55
1qkia.pdb               1  DHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDV   60
                                KEMVQN   LRF N IF   WN D I  V  T  E  G E R GY D  G   D 

1dpga.pdb              56  IQNHTMQIVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGD---  112
1qkia.pdb              61  MQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEV---QA-NNVVLGQYVGNPDGE  116
                            QNH  Q     AMEKP S    D R  K                   V  QY       

1dpga.pdb             113  -SADFKPYLEELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFK  171
1qkia.pdb             117  GEA-TKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFH  175
                             A  K YL    VP  S   TF A  L     RW GVPF  R GK L      V   F 

1dpga.pdb             172  AGTFNFGSEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTP  231
1qkia.pdb             176  DVAGDIF-HQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTY--GNRYK-N  231
                                    Q      L I   P  A   K   K     FN     L  T          

1dpga.pdb             232  G----SNFADWNGVSIAWKFVDAISAVYTADKAPLETYKSGSMGPEASDKLLAANGDAWV  287
1qkia.pdb             232  -VKLPMHFVRSDELLEAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELMKRVGFQYE  290
                                  F        AW             K     Y  GS GP   D L    G    

1dpga.pdb             288  FK-G---  290
1qkia.pdb             291  GTYKWVN  297
                                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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