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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:21:32 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/DAP_epimerase.html
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#====================================
# Aligned_structures: 2
#   1: 1bwza1.pdb
#   2: 1bwza2.pdb
#
# Length:        159
# Identity:       18/159 ( 11.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     18/159 ( 11.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           46/159 ( 28.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bwza1.pdb              1  MT--GEATHIY--------------DGFIT--LMQFSKMHGLGNDFVVVDGV---TQNVF   39
1bwza2.pdb              1  --NMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCG-AVSMGNPHCVVQVDDIQTAN--   55
                               GE                                    GN   VV      T N  

1bwza1.pdb             40  FTPETIRRLANR-HC-GIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQCG--NGARCF   95
1bwza2.pdb             56  -VEQLGPLLESHERFPE--RVNAGFMQI-INKE-HIKLRVYERG-AGETQ-ACGSGACAA  108
                                   L                       E     R          Q     GA   

1bwza1.pdb             96  ARFVTLKGLTNKKDISVSTQKGNMVLTVKDMNQIR----  130
1bwza2.pdb            109  VAVGIMQGLL-NNNVQVDLPGGSLMIEWNGV----GHPL  142
                                  GL       V    G                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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