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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:04:08 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/CCP_MauG_C.html
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#====================================
# Aligned_structures: 2
#   1: 1eb7a.pdb
#   2: 1iqca.pdb
#
# Length:        166
# Identity:       60/166 ( 36.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     60/166 ( 36.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/166 ( 12.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1eb7a.pdb               1  TPDSPFDLYLKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPF-G---LV-KK   55
1iqca.pdb               1  TPGSKFDKWLEGDKNALNQDELEGYNLFKGSGCVQCHNGPAVGGSSYQKMGVFKPYETKN   60
                           TP S FD  L GD  AL      G   F  SGC  CHNG   GG  Y           K 

1eb7a.pdb              56  PDA----DKGRFAVTKTQSDE--YVFRAAPLRNVALTAPYFHSGQVWELKDAVAIMGNAQ  109
1iqca.pdb              61  ---PAAGRMDVT-----GNEADRNVFKVPTLRNIELTYPYFHDGGAATLEQAVETMGRIQ  112
                                                   VF    LRN  LT PYFH G    L  AV  MG  Q

1eb7a.pdb             110  LGKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPASTETTPRPAE--  153
1iqca.pdb             113  LNREFNKDEVSKIVAFLKTLTGDQPDFKLPILPPSNNDTPRSQPYE  158
                           L      D V  IVAFL  L G QP    P LP S   TPR     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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