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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:03:23 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/CBD_6.html
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#====================================
# Aligned_structures: 2
#   1: 1cx1a.pdb
#   2: 1ulo.pdb
#
# Length:        181
# Identity:       45/181 ( 24.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     45/181 ( 24.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           57/181 ( 31.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1cx1a.pdb               1  ASLDSEVELLP-----HTSFAESLGPWSLYGTS-EPVFADGRMCVDLPGGQGNPW-----   49
1ulo.pdb                1  -----------ASPIGEGTFDDGPEGWVAYGTDGPLDTSTGALCVA-VP------AGSAQ   42
                                              F      W  YGT        G  CV               

1cx1a.pdb              50  -DAGLVYNGVPVGEG---E-SYVLSFTASATPDMPVRVLVGEGGGAYRTAFEQGS-A-PL  102
1ulo.pdb               43  YGVGVVLNGVA----IEEGTTYTLRYTATASTDVTVRALVGQNGAPYGTVL-D--TSPAL   95
                              G V NGV           Y L  TA A  D  VR LVG  G  Y T          L

1cx1a.pdb             103  TGEPATREYAFTSNLTFPPDG---DAPGQVAFHLGKAGA-----YEFCISQVSLTTSAT-  153
1ulo.pdb               96  TSEPRQVTETFTASATYPATPAADDPEGQIAFQLGG---FSADAWTLCLDDVALDSEV-E  151
                           T EP      FT   T P      D  GQ AF LG            C   V L      

1cx1a.pdb                  -     
1ulo.pdb              152  L  152
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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